BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021F10SP1|AL427797
(973 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig792 1625 0.0
>3x_Contig792
Length = 2203
Score = 1625 bits (818), Expect = 0.0
Identities = 827/830 (99%), Gaps = 1/830 (0%)
Strand = Plus / Plus
Query: 145 cgtatcttgttttgatcttcaatgcagtttccgttattgcacagacgatctcaaaagtta 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgtatcttgttttgatcttcaatgcagtttccgttattgcacagacgatctcaaaagtta 60
Query: 205 agaacccaagaatatcgattacatcatcgtgaggtttactgtctatcaactgagatattc 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaacccaagaatatcgattacatcatcgtgaggtttactgtctatcaactgagatattc 120
Query: 265 cagaccaatctttgaatctttttgattttctgaaagtgaaactggcttgtcgacaatcag 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagaccaatctttgaatctttttgattttctgaaagtgaaactggcttgtcgacaatcag 180
Query: 325 accaatgcacgtattcttccttcgtcatacctctagtcctatcatcagccatttttagtc 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accaatgcacgtattcttccttcgtcatacctctagtcctatcatcagccatttttagtc 240
Query: 385 tcttcaatgtagccatattagcctcccgttcatcatcgtccatatcatcctcatctggat 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcttcaatgtagccatattagcctcccgttcatcatcgtccatatcatcctcatctggat 300
Query: 445 tctcaagaggttgctcattgaacatgaactgtaactcccatggtagcttgatgcttgact 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctcaagaggttgctcattgaacatgaactgtaactcccatggtagcttgatgcttgact 360
Query: 505 tcttcactttcatgttgactccggctccgtctttgtcctttttgccagcatcatcatcat 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcttcactttcatgttgactccggctccgtctttgtcctttttgccagcatcatcatcat 420
Query: 565 caataccgcca-gaccagagccatctcctgcaccaccacctgctgcagcttgctgtgcat 623
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caataccgccaggaccagagccatctcctgcaccaccacctgctgcagcttgctgtgcat 480
Query: 624 cttgatctttggcattttttctaaggtccttccatgatagatatgtacgcaatctgttca 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cttgatctttggcattttttctaaggtccttccatgatagatatgtacgcaatctgttca 540
Query: 684 ccttagctttatcatgtctgattaaraagatgacatcttcgggcactatactcttactcc 743
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 541 ccttagctttatcatgtctgattaaaaagatgacatcttcgggcactatactcttactcc 600
Query: 744 ccctacaattggccgttctggttgcttggagtaaaatttcaacaacctgccctctcacta 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccctacaattggccgttctggttgcttggagtaaaatttcaacaacctgccctctcacta 660
Query: 804 tatcctcgatcaaagatgttgtttcaactggtggttcgttgttttcaccagagacaaaca 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tatcctcgatcaaagatgttgtttcaactggtggttcgttgttttcaccagagacaaaca 720
Query: 864 tcatttgttgtatctcaacacgatacttgtacttgtcagacattatgccacgattattta 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcatttgttgtatctcaacacgatacttgtacttgtcagacattatgccacgattattta 780
Query: 924 ttgtttccgcgctamcaacacaagcgaatccttgtccatatattattgaa 973
|||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 781 ttgtttccgcgctaccaacacaagcgaatccttgtccatatattattgaa 830
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7998
Number of Sequences: 1807
Number of extensions: 7998
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 973
length of database: 10,358,551
effective HSP length: 16
effective length of query: 957
effective length of database: 10,329,639
effective search space: 9885464523
effective search space used: 9885464523
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)